Ok,
I followed your advice and manually compiled capnproto v0.5.3.1 and manually compiled pycapnp v0.5.12. Everything compiles and installs correctly. However, I am still receiving failing unit tests as outlined above.
I feel there is some other probably system level requirement that is impeding the capnproto framework to function properly.
Is there a way to get a pedantic requirements list for an Ubuntu system?
Build output:
+ NAME=nupic
++ pwd
+ WD=/home/cswanson/devel/Nupic
+ NAMEENV=nupic-env
+ export PATH=/usr/local/capnproto/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
+ PATH=/usr/local/capnproto/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
+ export LD_LIBRARY_PATH=/usr/local/capnproto/lib
+ LD_LIBRARY_PATH=/usr/local/capnproto/lib
+ export 'CFLAGS=-pthread -I/usr/local/capnproto/include -L/usr/local/capnproto/lib -lcapnp -lkj -lpthread -lrt'
+ CFLAGS='-pthread -I/usr/local/capnproto/include -L/usr/local/capnproto/lib -lcapnp -lkj -lpthread -lrt'
+ virtualenv nupic-env
New python executable in nupic-env/bin/python
Installing setuptools, pip...done.
+ source nupic-env/bin/activate
++ deactivate nondestructive
++ unset pydoc
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/cswanson/devel/Nupic/nupic-env
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/usr/local/capnproto/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
++ PATH=/home/cswanson/devel/Nupic/nupic-env/bin:/usr/local/capnproto/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ '[' x '!=' x ']'
+++ basename /home/cswanson/devel/Nupic/nupic-env
++ '[' nupic-env = __ ']'
+++ basename /home/cswanson/devel/Nupic/nupic-env
++ PS1='(nupic-env)'
++ export PS1
++ alias 'pydoc=python -m pydoc'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ pip install --upgrade distribute
Downloading/unpacking distribute
Downloading distribute-0.7.3.zip (145kB): 145kB downloaded
Running setup.py (path:/home/cswanson/devel/Nupic/nupic-env/build/distribute/setup.py) egg_info for package distribute
Downloading/unpacking setuptools>=0.7 from https://pypi.python.org/packages/0f/40/b3c98aa32bc91d3d8c573443a29aa482d77268d77132b63f09d8385b21ff/setuptools-37.0.0-py2.py3-none-any.whl#md5=c2b8da5297380cb0acc855c7c514ab2a (from distribute)
Downloading setuptools-37.0.0-py2.py3-none-any.whl (481kB): 481kB downloaded
Installing collected packages: setuptools, distribute
Found existing installation: setuptools 2.2
Uninstalling setuptools:
Successfully uninstalled setuptools
Running setup.py install for distribute
Successfully installed setuptools distribute
Cleaning up...
+ pip install -U pip
Downloading/unpacking pip from https://pypi.python.org/packages/b6/ac/7015eb97dc749283ffdec1c3a88ddb8ae03b8fad0f0e611408f196358da3/pip-9.0.1-py2.py3-none-any.whl#md5=297dbd16ef53bcef0447d245815f5144
Downloading pip-9.0.1-py2.py3-none-any.whl (1.3MB): 1.3MB downloaded
Installing collected packages: pip
Found existing installation: pip 1.5.4
Uninstalling pip:
Successfully uninstalled pip
Successfully installed pip
Cleaning up...
+ pip install cython
Collecting cython
Using cached Cython-0.27.3-cp27-cp27mu-manylinux1_x86_64.whl
Installing collected packages: cython
Successfully installed cython-0.27.3
+ cd /home/cswanson/devel/Nupic
+ pip install requests
Collecting requests
Using cached requests-2.18.4-py2.py3-none-any.whl
Collecting idna<2.7,>=2.5 (from requests)
Using cached idna-2.6-py2.py3-none-any.whl
Collecting urllib3<1.23,>=1.21.1 (from requests)
Using cached urllib3-1.22-py2.py3-none-any.whl
Collecting certifi>=2017.4.17 (from requests)
Using cached certifi-2017.11.5-py2.py3-none-any.whl
Collecting chardet<3.1.0,>=3.0.2 (from requests)
Using cached chardet-3.0.4-py2.py3-none-any.whl
Installing collected packages: idna, urllib3, certifi, chardet, requests
Successfully installed certifi-2017.11.5 chardet-3.0.4 idna-2.6 requests-2.18.4 urllib3-1.22
+ pip install -v /home/cswanson/devel/Nupic/pycapnp
Processing ./pycapnp
Running setup.py (path:/tmp/pip-olSsKa-build/setup.py) egg_info for package from file:///home/cswanson/devel/Nupic/pycapnp
Running command python setup.py egg_info
Compiling capnp/lib/capnp.pyx because it changed.
[1/1] Cythonizing capnp/lib/capnp.pyx
running egg_info
creating pip-egg-info/pycapnp.egg-info
writing pip-egg-info/pycapnp.egg-info/PKG-INFO
writing top-level names to pip-egg-info/pycapnp.egg-info/top_level.txt
writing dependency_links to pip-egg-info/pycapnp.egg-info/dependency_links.txt
writing entry points to pip-egg-info/pycapnp.egg-info/entry_points.txt
writing manifest file 'pip-egg-info/pycapnp.egg-info/SOURCES.txt'
reading manifest file 'pip-egg-info/pycapnp.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'pip-egg-info/pycapnp.egg-info/SOURCES.txt'
Source in /tmp/pip-olSsKa-build has version 0.5.12, which satisfies requirement pycapnp==0.5.12 from file:///home/cswanson/devel/Nupic/pycapnp
Installing collected packages: pycapnp
Running setup.py install for pycapnp ... Running command /home/cswanson/devel/Nupic/nupic-env/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-olSsKa-build/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-q9gtdZ-record/install-record.txt --single-version-externally-managed --compile --install-headers /home/cswanson/devel/Nupic/nupic-env/include/site/python2.7/pycapnp
running install
running build
running build_py
creating build
creating build/lib.linux-x86_64-2.7
creating build/lib.linux-x86_64-2.7/capnp
copying capnp/__init__.py -> build/lib.linux-x86_64-2.7/capnp
copying capnp/_gen.py -> build/lib.linux-x86_64-2.7/capnp
copying capnp/version.py -> build/lib.linux-x86_64-2.7/capnp
copying capnp/__init__.pxd -> build/lib.linux-x86_64-2.7/capnp
copying capnp/schema.capnp -> build/lib.linux-x86_64-2.7/capnp
copying capnp/c++.capnp -> build/lib.linux-x86_64-2.7/capnp
creating build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/non_circular.pxd -> build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/helpers.pxd -> build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/__init__.pxd -> build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/serialize.h -> build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/capabilityHelper.h -> build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/checkCompiler.h -> build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/asyncHelper.h -> build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/rpcHelper.h -> build/lib.linux-x86_64-2.7/capnp/helpers
copying capnp/helpers/fixMaybe.h -> build/lib.linux-x86_64-2.7/capnp/helpers
creating build/lib.linux-x86_64-2.7/capnp/includes
copying capnp/includes/capnp_cpp.pxd -> build/lib.linux-x86_64-2.7/capnp/includes
copying capnp/includes/__init__.pxd -> build/lib.linux-x86_64-2.7/capnp/includes
copying capnp/includes/types.pxd -> build/lib.linux-x86_64-2.7/capnp/includes
copying capnp/includes/schema_cpp.pxd -> build/lib.linux-x86_64-2.7/capnp/includes
creating build/lib.linux-x86_64-2.7/capnp/lib
copying capnp/lib/capnp.pxd -> build/lib.linux-x86_64-2.7/capnp/lib
copying capnp/lib/__init__.pxd -> build/lib.linux-x86_64-2.7/capnp/lib
copying capnp/lib/__init__.py -> build/lib.linux-x86_64-2.7/capnp/lib
copying capnp/lib/pickle_helper.py -> build/lib.linux-x86_64-2.7/capnp/lib
copying capnp/lib/capnp.pyx -> build/lib.linux-x86_64-2.7/capnp/lib
creating build/lib.linux-x86_64-2.7/capnp/templates
copying capnp/templates/setup.py.tmpl -> build/lib.linux-x86_64-2.7/capnp/templates
copying capnp/templates/module.pyx -> build/lib.linux-x86_64-2.7/capnp/templates
running build_ext
CAUGHT
creating /tmp/tmpvcS1QX/tmp
cc -c /tmp/timer_create6G3lrF.c -o /tmp/tmpvcS1QX/tmp/timer_create6G3lrF.o
cc /tmp/tmpvcS1QX/tmp/timer_create6G3lrF.o -o /tmp/tmpvcS1QX/a.out
/tmp/tmpvcS1QX/tmp/timer_create6G3lrF.o: In function `main':
timer_create6G3lrF.c:(.text+0x15): undefined reference to `timer_create'
collect2: error: ld returned 1 exit status
creating tmp
creating tmp/tmpvcS1QX
x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -pthread -I/usr/local/capnproto/include -L/usr/local/capnproto/lib -lcapnp -lkj -lpthread -lrt -fPIC -I/usr/local/capnproto/include -c /tmp/tmpvcS1QX/vers.cpp -o tmp/tmpvcS1QX/vers.o --std=c++11
cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ [enabled by default]
x86_64-linux-gnu-gcc -pthread tmp/tmpvcS1QX/vers.o -lrt -o /tmp/tmpvcS1QX/vers
efile output: 0 vers: 0.5.3
building 'capnp.lib.capnp' extension
creating build/temp.linux-x86_64-2.7
creating build/temp.linux-x86_64-2.7/capnp
creating build/temp.linux-x86_64-2.7/capnp/lib
x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -pthread -I/usr/local/capnproto/include -L/usr/local/capnproto/lib -lcapnp -lkj -lpthread -lrt -fPIC -I. -I/usr/include/python2.7 -c capnp/lib/capnp.cpp -o build/temp.linux-x86_64-2.7/capnp/lib/capnp.o --std=c++11
cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ [enabled by default]
In file included from capnp/lib/capnp.cpp:576:0:
./capnp/helpers/rpcHelper.h: In function ‘capnp::Capability::Client restoreHelper(capnp::RpcSystem<capnp::rpc::twoparty::VatId>&, capnp::MessageBuilder&)’:
./capnp/helpers/rpcHelper.h:42:72: warning: ‘capnp::Capability::Client capnp::RpcSystem<SturdyRefHostId>::restore(typename VatId::Reader, capnp::AnyPointer::Reader) [with VatId = capnp::rpc::twoparty::VatId; typename VatId::Reader = capnp::rpc::twoparty::VatId::Reader]’ is deprecated (declared at /usr/local/capnproto/include/capnp/rpc.h:366) [-Wdeprecated-declarations]
return client.restore(hostId, objectId.getRoot<capnp::AnyPointer>());
^
./capnp/helpers/rpcHelper.h: In function ‘capnp::Capability::Client restoreHelper(capnp::RpcSystem<capnp::rpc::twoparty::VatId>&, capnp::MessageReader&)’:
./capnp/helpers/rpcHelper.h:49:72: warning: ‘capnp::Capability::Client capnp::RpcSystem<SturdyRefHostId>::restore(typename VatId::Reader, capnp::AnyPointer::Reader) [with VatId = capnp::rpc::twoparty::VatId; typename VatId::Reader = capnp::rpc::twoparty::VatId::Reader]’ is deprecated (declared at /usr/local/capnproto/include/capnp/rpc.h:366) [-Wdeprecated-declarations]
return client.restore(hostId, objectId.getRoot<capnp::AnyPointer>());
^
./capnp/helpers/rpcHelper.h: In function ‘capnp::Capability::Client restoreHelper(capnp::RpcSystem<capnp::rpc::twoparty::VatId>&, capnp::AnyPointer::Reader&)’:
./capnp/helpers/rpcHelper.h:56:43: warning: ‘capnp::Capability::Client capnp::RpcSystem<SturdyRefHostId>::restore(typename VatId::Reader, capnp::AnyPointer::Reader) [with VatId = capnp::rpc::twoparty::VatId; typename VatId::Reader = capnp::rpc::twoparty::VatId::Reader]’ is deprecated (declared at /usr/local/capnproto/include/capnp/rpc.h:366) [-Wdeprecated-declarations]
return client.restore(hostId, objectId);
^
./capnp/helpers/rpcHelper.h: In function ‘capnp::Capability::Client restoreHelper(capnp::RpcSystem<capnp::rpc::twoparty::VatId>&, capnp::AnyPointer::Builder&)’:
./capnp/helpers/rpcHelper.h:63:43: warning: ‘capnp::Capability::Client capnp::RpcSystem<SturdyRefHostId>::restore(typename VatId::Reader, capnp::AnyPointer::Reader) [with VatId = capnp::rpc::twoparty::VatId; typename VatId::Reader = capnp::rpc::twoparty::VatId::Reader]’ is deprecated (declared at /usr/local/capnproto/include/capnp/rpc.h:366) [-Wdeprecated-declarations]
return client.restore(hostId, objectId);
^
./capnp/helpers/rpcHelper.h: In function ‘capnp::Capability::Client restoreHelper(capnp::RpcSystem<capnp::rpc::twoparty::VatId>&)’:
./capnp/helpers/rpcHelper.h:73:43: warning: ‘capnp::Capability::Client capnp::RpcSystem<SturdyRefHostId>::restore(typename VatId::Reader, capnp::AnyPointer::Reader) [with VatId = capnp::rpc::twoparty::VatId; typename VatId::Reader = capnp::rpc::twoparty::VatId::Reader]’ is deprecated (declared at /usr/local/capnproto/include/capnp/rpc.h:366) [-Wdeprecated-declarations]
return client.restore(hostId, objectId);
^
./capnp/helpers/rpcHelper.h: In constructor ‘ServerContextRestorer::ServerContextRestorer(kj::Own<kj::AsyncIoStream>&&, capnp::SturdyRefRestorer<capnp::AnyPointer>&)’:
./capnp/helpers/rpcHelper.h:107:50: warning: ‘capnp::RpcSystem<VatId> capnp::makeRpcServer(capnp::VatNetwork<VatId, ProvisionId, RecipientId, ThirdPartyCapId, JoinResult>&, capnp::SturdyRefRestorer<LocalSturdyRefObjectId>&) [with VatId = capnp::rpc::twoparty::VatId; LocalSturdyRefObjectId = capnp::AnyPointer; ProvisionId = capnp::rpc::twoparty::ProvisionId; RecipientId = capnp::rpc::twoparty::RecipientId; ThirdPartyCapId = capnp::rpc::twoparty::ThirdPartyCapId; JoinResult = capnp::rpc::twoparty::JoinResult]’ is deprecated (declared at /usr/local/capnproto/include/capnp/rpc.h:391) [-Wdeprecated-declarations]
rpcSystem(makeRpcServer(network, restorer)) {}
^
capnp/lib/capnp.cpp: In function ‘int __pyx_pf_5capnp_3lib_5capnp_14TwoPartyServer___init__(__pyx_obj_5capnp_3lib_5capnp_TwoPartyServer*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*, PyObject*)’:
capnp/lib/capnp.cpp:59189:189: warning: ‘capnp::RpcSystem<VatId> capnp::makeRpcServer(capnp::VatNetwork<VatId, ProvisionId, RecipientId, ThirdPartyCapId, JoinResult>&, capnp::SturdyRefRestorer<LocalSturdyRefObjectId>&) [with VatId = capnp::rpc::twoparty::VatId; LocalSturdyRefObjectId = capnp::AnyPointer; ProvisionId = capnp::rpc::twoparty::ProvisionId; RecipientId = capnp::rpc::twoparty::RecipientId; ThirdPartyCapId = capnp::rpc::twoparty::ThirdPartyCapId; JoinResult = capnp::rpc::twoparty::JoinResult]’ is deprecated (declared at /usr/local/capnproto/include/capnp/rpc.h:391) [-Wdeprecated-declarations]
__pyx_v_self->thisptr = new ::capnp::RpcSystem<capnp::rpc::twoparty::SturdyRefHostId>( ::capnp::makeRpcServer((*__pyx_v_self->_network->thisptr), (*__pyx_v_self->_restorer->thisptr)));
^
capnp/lib/capnp.cpp: In function ‘PyObject* __pyx_f_5capnp_3lib_5capnp_7_Schema_get_dependency(__pyx_obj_5capnp_3lib_5capnp__Schema*, PyObject*, int)’:
capnp/lib/capnp.cpp:63075:62: warning: ‘capnp::Schema capnp::Schema::getDependency(uint64_t) const’ is deprecated (declared at /usr/local/capnproto/include/capnp/schema.h:751) [-Wdeprecated-declarations]
__pyx_t_7 = __pyx_v_self->thisptr.getDependency(__pyx_t_6);
^
capnp/lib/capnp.cpp: In function ‘PyObject* __pyx_f_5capnp_3lib_5capnp_13_StructSchema_get_dependency(__pyx_obj_5capnp_3lib_5capnp__StructSchema*, PyObject*, int)’:
capnp/lib/capnp.cpp:64889:62: warning: ‘capnp::Schema capnp::Schema::getDependency(uint64_t) const’ is deprecated (declared at /usr/local/capnproto/include/capnp/schema.h:751) [-Wdeprecated-declarations]
__pyx_t_7 = __pyx_v_self->thisptr.getDependency(__pyx_t_6);
^
capnp/lib/capnp.cpp: In function ‘PyObject* __pyx_f_5capnp_3lib_5capnp_16_InterfaceSchema_get_dependency(__pyx_obj_5capnp_3lib_5capnp__InterfaceSchema*, PyObject*, int)’:
capnp/lib/capnp.cpp:67552:62: warning: ‘capnp::Schema capnp::Schema::getDependency(uint64_t) const’ is deprecated (declared at /usr/local/capnproto/include/capnp/schema.h:751) [-Wdeprecated-declarations]
__pyx_t_7 = __pyx_v_self->thisptr.getDependency(__pyx_t_6);
^
c++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -pthread -I/usr/local/capnproto/include -L/usr/local/capnproto/lib -lcapnp -lkj -lpthread -lrt build/temp.linux-x86_64-2.7/capnp/lib/capnp.o -lcapnpc -lcapnp-rpc -lcapnp -lkj-async -lkj -o build/lib.linux-x86_64-2.7/capnp/lib/capnp.so
running install_lib
creating /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp
copying build/lib.linux-x86_64-2.7/capnp/schema.capnp -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp
copying build/lib.linux-x86_64-2.7/capnp/__init__.py -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp
creating /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/includes
copying build/lib.linux-x86_64-2.7/capnp/includes/capnp_cpp.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/includes
copying build/lib.linux-x86_64-2.7/capnp/includes/__init__.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/includes
copying build/lib.linux-x86_64-2.7/capnp/includes/types.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/includes
copying build/lib.linux-x86_64-2.7/capnp/includes/schema_cpp.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/includes
creating /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/serialize.h -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/capabilityHelper.h -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/non_circular.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/helpers.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/__init__.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/checkCompiler.h -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/asyncHelper.h -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/rpcHelper.h -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/helpers/fixMaybe.h -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/helpers
copying build/lib.linux-x86_64-2.7/capnp/__init__.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp
copying build/lib.linux-x86_64-2.7/capnp/_gen.py -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp
copying build/lib.linux-x86_64-2.7/capnp/c++.capnp -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp
creating /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/templates
copying build/lib.linux-x86_64-2.7/capnp/templates/setup.py.tmpl -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/templates
copying build/lib.linux-x86_64-2.7/capnp/templates/module.pyx -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/templates
copying build/lib.linux-x86_64-2.7/capnp/version.py -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp
creating /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib
copying build/lib.linux-x86_64-2.7/capnp/lib/__init__.py -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib
copying build/lib.linux-x86_64-2.7/capnp/lib/capnp.so -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib
copying build/lib.linux-x86_64-2.7/capnp/lib/capnp.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib
copying build/lib.linux-x86_64-2.7/capnp/lib/capnp.pyx -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib
copying build/lib.linux-x86_64-2.7/capnp/lib/__init__.pxd -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib
copying build/lib.linux-x86_64-2.7/capnp/lib/pickle_helper.py -> /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib
byte-compiling /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/__init__.py to __init__.pyc
byte-compiling /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/_gen.py to _gen.pyc
byte-compiling /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/version.py to version.pyc
byte-compiling /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib/__init__.py to __init__.pyc
byte-compiling /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/capnp/lib/pickle_helper.py to pickle_helper.pyc
running install_egg_info
running egg_info
creating pycapnp.egg-info
writing pycapnp.egg-info/PKG-INFO
writing top-level names to pycapnp.egg-info/top_level.txt
writing dependency_links to pycapnp.egg-info/dependency_links.txt
writing entry points to pycapnp.egg-info/entry_points.txt
writing manifest file 'pycapnp.egg-info/SOURCES.txt'
reading manifest file 'pycapnp.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'pycapnp.egg-info/SOURCES.txt'
Copying pycapnp.egg-info to /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages/pycapnp-0.5.12-py2.7.egg-info
running install_scripts
Installing capnpc-cython script to /home/cswanson/devel/Nupic/nupic-env/bin
writing list of installed files to '/tmp/pip-q9gtdZ-record/install-record.txt'
done
Removing source in /tmp/pip-olSsKa-build
Successfully installed pycapnp-0.5.12
Cleaning up...
+ cd /home/cswanson/devel/Nupic
+ git clone https://github.com/numenta/nupic
Cloning into 'nupic'...
remote: Counting objects: 77019, done.
remote: Total 77019 (delta 0), reused 0 (delta 0), pack-reused 77019
Receiving objects: 100% (77019/77019), 146.12 MiB | 3.69 MiB/s, done.
Resolving deltas: 100% (47357/47357), done.
Checking connectivity... done.
+ cd /home/cswanson/devel/Nupic/nupic
+ pip install -e .
Obtaining file:///home/cswanson/devel/Nupic/nupic
Collecting asteval==0.9.1 (from nupic==1.0.4.dev0)
Using cached asteval-0.9.1.tar.gz
Collecting coverage==3.7.1 (from nupic==1.0.4.dev0)
Using cached coverage-3.7.1.tar.gz
Collecting mock==1.0.1 (from nupic==1.0.4.dev0)
Using cached mock-1.0.1.zip
Collecting ordereddict==1.1 (from nupic==1.0.4.dev0)
Using cached ordereddict-1.1.tar.gz
Collecting psutil==1.0.1 (from nupic==1.0.4.dev0)
Using cached psutil-1.0.1.tar.gz
Collecting pytest==3.0.7 (from nupic==1.0.4.dev0)
Using cached pytest-3.0.7-py2.py3-none-any.whl
Collecting pytest-cov==2.5.0 (from nupic==1.0.4.dev0)
Using cached pytest_cov-2.5.0-py2.py3-none-any.whl
Collecting pytest-xdist==1.16.0 (from nupic==1.0.4.dev0)
Using cached pytest-xdist-1.16.0.tar.gz
Collecting python-dateutil==2.1 (from nupic==1.0.4.dev0)
Using cached python-dateutil-2.1.tar.gz
Collecting PyYAML==3.10 (from nupic==1.0.4.dev0)
Using cached PyYAML-3.10.tar.gz
Collecting unittest2==0.5.1 (from nupic==1.0.4.dev0)
Using cached unittest2-0.5.1.zip
Collecting validictory==0.9.1 (from nupic==1.0.4.dev0)
Using cached validictory-0.9.1.tar.gz
Collecting PyMySQL==0.6.2 (from nupic==1.0.4.dev0)
Using cached PyMySQL-0.6.2-py2.py3-none-any.whl
Collecting DBUtils==1.1 (from nupic==1.0.4.dev0)
Using cached DBUtils-1.1.tar.gz
Collecting pyproj==1.9.3 (from nupic==1.0.4.dev0)
Using cached pyproj-1.9.3.tar.gz
Collecting prettytable==0.7.2 (from nupic==1.0.4.dev0)
Using cached prettytable-0.7.2.zip
Collecting nupic.bindings==1.0.0 (from nupic==1.0.4.dev0)
Using cached nupic.bindings-1.0.0-cp27-cp27mu-manylinux1_x86_64.whl
Collecting numpy==1.12.1 (from nupic==1.0.4.dev0)
Using cached numpy-1.12.1-cp27-cp27mu-manylinux1_x86_64.whl
Requirement already satisfied: pycapnp==0.5.12 in /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages (from nupic==1.0.4.dev0)
Requirement already satisfied: setuptools in /home/cswanson/devel/Nupic/nupic-env/lib/python2.7/site-packages (from pytest==3.0.7->nupic==1.0.4.dev0)
Collecting py>=1.4.29 (from pytest==3.0.7->nupic==1.0.4.dev0)
Using cached py-1.5.2-py2.py3-none-any.whl
Collecting execnet>=1.1 (from pytest-xdist==1.16.0->nupic==1.0.4.dev0)
Using cached execnet-1.5.0-py2.py3-none-any.whl
Collecting six (from python-dateutil==2.1->nupic==1.0.4.dev0)
Using cached six-1.11.0-py2.py3-none-any.whl
Collecting apipkg>=1.4 (from execnet>=1.1->pytest-xdist==1.16.0->nupic==1.0.4.dev0)
Using cached apipkg-1.4-py2.py3-none-any.whl
Installing collected packages: asteval, coverage, mock, ordereddict, psutil, py, pytest, pytest-cov, apipkg, execnet, pytest-xdist, six, python-dateutil, PyYAML, unittest2, validictory, PyMySQL, DBUtils, pyproj, prettytable, numpy, nupic.bindings, nupic
Running setup.py install for asteval ... done
Running setup.py install for coverage ... done
Running setup.py install for mock ... done
Running setup.py install for ordereddict ... done
Running setup.py install for psutil ... done
Running setup.py install for pytest-xdist ... done
Running setup.py install for python-dateutil ... done
Running setup.py install for PyYAML ... done
Running setup.py install for unittest2 ... done
Running setup.py install for validictory ... done
Running setup.py install for DBUtils ... done
Running setup.py install for pyproj ... done
Running setup.py install for prettytable ... done
Running setup.py develop for nupic
Successfully installed DBUtils-1.1 PyMySQL-0.6.2 PyYAML-3.10 apipkg-1.4 asteval-0.9.1 coverage-3.7.1 execnet-1.5.0 mock-1.0.1 numpy-1.12.1 nupic nupic.bindings-1.0.0 ordereddict-1.1 prettytable-0.7.2 psutil-1.0.1 py-1.5.2 pyproj-1.9.3 pytest-3.0.7 pytest-cov-2.5.0 pytest-xdist-1.16.0 python-dateutil-2.1 six-1.11.0 unittest2-0.5.1 validictory-0.9.1